diff --git a/src/book/mod.rs b/src/book/mod.rs
index cdcb3358..88d0e804 100644
--- a/src/book/mod.rs
+++ b/src/book/mod.rs
@@ -487,6 +487,22 @@ impl MDBook {
         None
     }
 
+    pub fn has_additional_js(&self) -> bool {
+        if let Some(htmlconfig) = self.config.get_html_config() {
+            return htmlconfig.has_additional_js();
+        }
+
+        false
+    }
+
+    pub fn get_additional_js(&self) -> &[PathBuf] {
+        if let Some(htmlconfig) = self.config.get_html_config() {
+            return htmlconfig.get_additional_js();
+        }
+
+        &[]
+    }
+
     pub fn has_additional_css(&self) -> bool {
         if let Some(htmlconfig) = self.config.get_html_config() {
             return htmlconfig.has_additional_css();
diff --git a/src/config/htmlconfig.rs b/src/config/htmlconfig.rs
index 4beb14c4..8ea1f08f 100644
--- a/src/config/htmlconfig.rs
+++ b/src/config/htmlconfig.rs
@@ -8,6 +8,7 @@ pub struct HtmlConfig {
     theme: Option<PathBuf>,
     google_analytics: Option<String>,
     additional_css: Vec<PathBuf>,
+    additional_js: Vec<PathBuf>,
 }
 
 impl HtmlConfig {
@@ -28,6 +29,7 @@ impl HtmlConfig {
             theme: None,
             google_analytics: None,
             additional_css: Vec::new(),
+            additional_js: Vec::new(),
         }
     }
 
@@ -64,6 +66,16 @@ impl HtmlConfig {
             }
         }
 
+        if let Some(scriptpaths) = tomlconfig.additional_js {
+            for path in scriptpaths {
+                if path.is_relative() {
+                    self.additional_js.push(root.join(path));
+                } else {
+                    self.additional_js.push(path);
+                }
+            }
+        }
+
         self
     }
 
@@ -114,4 +126,12 @@ impl HtmlConfig {
     pub fn get_additional_css(&self) -> &[PathBuf] {
         &self.additional_css
     }
+
+    pub fn has_additional_js(&self) -> bool {
+        !self.additional_js.is_empty()
+    }
+
+    pub fn get_additional_js(&self) -> &[PathBuf] {
+        &self.additional_js
+    }
 }
diff --git a/src/config/tomlconfig.rs b/src/config/tomlconfig.rs
index 2a08fa84..ca7388bd 100644
--- a/src/config/tomlconfig.rs
+++ b/src/config/tomlconfig.rs
@@ -25,6 +25,7 @@ pub struct TomlHtmlConfig {
     pub theme: Option<PathBuf>,
     pub google_analytics: Option<String>,
     pub additional_css: Option<Vec<PathBuf>>,
+    pub additional_js: Option<Vec<PathBuf>>,
 }
 
 /// Returns a TomlConfig from a TOML string
diff --git a/src/renderer/html_handlebars/hbs_renderer.rs b/src/renderer/html_handlebars/hbs_renderer.rs
index f64ae6f5..8429fa16 100644
--- a/src/renderer/html_handlebars/hbs_renderer.rs
+++ b/src/renderer/html_handlebars/hbs_renderer.rs
@@ -188,14 +188,22 @@ impl Renderer for HtmlHandlebars {
         book.write_file("_FontAwesome/fonts/fontawesome-webfont.woff2", theme::FONT_AWESOME_WOFF2)?;
         book.write_file("_FontAwesome/fonts/FontAwesome.ttf", theme::FONT_AWESOME_TTF)?;
 
-        for style in book.get_additional_css() {
+        for custom_file in book.get_additional_css()
+                .iter()
+                .chain(book.get_additional_js().iter()) {
             let mut data = Vec::new();
-            let mut f = File::open(style)?;
+            let mut f = File::open(custom_file)?;
             f.read_to_end(&mut data)?;
 
-            let name = match style.strip_prefix(book.get_root()) {
+            let name = match custom_file.strip_prefix(book.get_root()) {
                 Ok(p) => p.to_str().expect("Could not convert to str"),
-                Err(_) => style.file_name().expect("File has a file name").to_str().expect("Could not convert to str"),
+                Err(_) => {
+                    custom_file
+                        .file_name()
+                        .expect("File has a file name")
+                        .to_str()
+                        .expect("Could not convert to str")
+                }
             };
 
             book.write_file(name, &data)?;
@@ -241,6 +249,18 @@ fn make_data(book: &MDBook) -> Result<serde_json::Map<String, serde_json::Value>
         data.insert("additional_css".to_owned(), json!(css));
     }
 
+    // Add check to see if there is an additional script
+    if book.has_additional_js() {
+        let mut js = Vec::new();
+        for script in book.get_additional_js() {
+            match script.strip_prefix(book.get_root()) {
+                Ok(p) => js.push(p.to_str().expect("Could not convert to str")),
+                Err(_) => js.push(script.file_name().expect("File has a file name").to_str().expect("Could not convert to str")),
+            }
+        }
+        data.insert("additional_js".to_owned(), json!(js));
+    }
+
     let mut chapters = vec![];
 
     for item in book.iter() {
diff --git a/src/theme/index.hbs b/src/theme/index.hbs
index b8076d16..27464213 100644
--- a/src/theme/index.hbs
+++ b/src/theme/index.hbs
@@ -44,8 +44,15 @@
                 document.write(unescape("%3Cscript src='jquery.js'%3E%3C/script%3E"));
             }
         </script>
+
         <!-- Fetch store.js from local - TODO add CDN when 2.x.x is available on cdnjs -->
         <script src="store.js"></script>
+
+        <!-- Custom JS script -->
+        {{#each additional_js}}
+        <script type="text/javascript" src="{{this}}"></script>
+        {{/each}}
+
     </head>
     <body class="light">
         <!-- Set the theme before any content is loaded, prevents flash -->
diff --git a/tests/tomlconfig.rs b/tests/tomlconfig.rs
index 91c40016..e4398495 100644
--- a/tests/tomlconfig.rs
+++ b/tests/tomlconfig.rs
@@ -114,4 +114,18 @@ fn from_toml_output_html_additional_stylesheet() {
     let htmlconfig = config.get_html_config().expect("There should be an HtmlConfig");
 
     assert_eq!(htmlconfig.get_additional_css(), &[PathBuf::from("root/custom.css"), PathBuf::from("root/two/custom.css")]);
-}
\ No newline at end of file
+}
+
+// Tests that the `output.html.additional-js` key is correcly parsed in the TOML config
+#[test]
+fn from_toml_output_html_additional_scripts() {
+    let toml = r#"[output.html]
+    additional-js = ["custom.js", "two/custom.js"]"#;
+
+    let parsed = TomlConfig::from_toml(&toml).expect("This should parse");
+    let config = BookConfig::from_tomlconfig("root", parsed);
+
+    let htmlconfig = config.get_html_config().expect("There should be an HtmlConfig");
+
+    assert_eq!(htmlconfig.get_additional_js(), &[PathBuf::from("root/custom.js"), PathBuf::from("root/two/custom.js")]);
+}